Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim55G3X8Y1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Mir8117-201ENSMUST00000184773 107 ntBASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim55G3X8Y1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim55G3X8Y1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm14822-201ENSMUST00000122247 291 ntBASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm10175-201ENSMUST00000086013 645 ntBASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim55G3X8Y1 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Mir3113-201ENSMUST00000175478 76 ntBASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms