Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NpcdF8VQB8 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.47■□□□□ 0.07
NpcdF8VQB8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Daam2-202ENSMUST00000224595 1926 ntBASIC15.47■□□□□ 0.07
NpcdF8VQB8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.47■□□□□ 0.07
NpcdF8VQB8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Gm10312-201ENSMUST00000078515 489 ntBASIC15.47■□□□□ 0.07
NpcdF8VQB8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.47■□□□□ 0.07
NpcdF8VQB8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.46■□□□□ 0.07
NpcdF8VQB8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Gm9540-201ENSMUST00000188230 478 ntBASIC15.46■□□□□ 0.07
NpcdF8VQB8 Gm45224-201ENSMUST00000208203 414 ntBASIC15.46■□□□□ 0.07
NpcdF8VQB8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NpcdF8VQB8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
NpcdF8VQB8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NpcdF8VQB8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NpcdF8VQB8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NpcdF8VQB8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
NpcdF8VQB8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Mir6958-201ENSMUST00000184207 73 ntBASIC15.45■□□□□ 0.06
NpcdF8VQB8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Gm9555-201ENSMUST00000200908 583 ntBASIC15.45■□□□□ 0.06
NpcdF8VQB8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NpcdF8VQB8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.44■□□□□ 0.06
NpcdF8VQB8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NpcdF8VQB8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms