Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdh9F8VPK8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh9F8VPK8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh9F8VPK8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh9F8VPK8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.19□□□□□ -0.3
Pcdh9F8VPK8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh9F8VPK8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pcdh9F8VPK8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms