Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm12015-201ENSMUST00000117065 843 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm13996-201ENSMUST00000118456 430 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm11597-201ENSMUST00000121423 964 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm44651-201ENSMUST00000207343 372 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm10076-201ENSMUST00000073238 384 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.4■□□□□ 0.06
Ube4aE9Q735 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.4■□□□□ 0.06
Ube4aE9Q735 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ube4aE9Q735 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Ube4aE9Q735 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Gm7857-201ENSMUST00000117957 358 ntBASIC15.39■□□□□ 0.05
Ube4aE9Q735 Gm14277-201ENSMUST00000121195 360 ntBASIC15.39■□□□□ 0.05
Ube4aE9Q735 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ube4aE9Q735 Gm44262-201ENSMUST00000204969 372 ntBASIC15.39■□□□□ 0.05
Ube4aE9Q735 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms