Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Gm11980-201ENSMUST00000121445 986 ntBASIC17.2■□□□□ 0.34
Chd2E9PZM4 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Gm5537-201ENSMUST00000091117 1252 ntBASIC17.2■□□□□ 0.34
Chd2E9PZM4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC17.2■□□□□ 0.34
Chd2E9PZM4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Gm14219-201ENSMUST00000120414 288 ntBASIC17.19■□□□□ 0.34
Chd2E9PZM4 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC17.19■□□□□ 0.34
Chd2E9PZM4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.19■□□□□ 0.34
Chd2E9PZM4 AC122350.1-201ENSMUST00000228135 533 ntBASIC17.19■□□□□ 0.34
Chd2E9PZM4 AC156501.1-201ENSMUST00000228219 270 ntBASIC17.19■□□□□ 0.34
Chd2E9PZM4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Gm15784-201ENSMUST00000120260 1462 ntBASIC17.19■□□□□ 0.34
Chd2E9PZM4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.19■□□□□ 0.34
Chd2E9PZM4 Gm38151-201ENSMUST00000195085 289 ntBASIC17.19■□□□□ 0.34
Chd2E9PZM4 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.19■□□□□ 0.34
Chd2E9PZM4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Gm38117-201ENSMUST00000194653 939 ntBASIC17.18■□□□□ 0.34
Chd2E9PZM4 Gm18059-201ENSMUST00000208073 580 ntBASIC17.18■□□□□ 0.34
Chd2E9PZM4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.18■□□□□ 0.34
Chd2E9PZM4 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 CT009489.1-201ENSMUST00000227740 1893 ntBASIC17.18■□□□□ 0.34
Chd2E9PZM4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd2E9PZM4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd2E9PZM4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Gm26013-201ENSMUST00000104404 119 ntBASIC17.17■□□□□ 0.34
Chd2E9PZM4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC17.17■□□□□ 0.34
Chd2E9PZM4 Gm12030-201ENSMUST00000121917 223 ntBASIC17.17■□□□□ 0.34
Chd2E9PZM4 Gm22877-201ENSMUST00000175451 105 ntBASIC17.17■□□□□ 0.34
Chd2E9PZM4 Gm18711-201ENSMUST00000199341 750 ntBASIC17.17■□□□□ 0.34
Chd2E9PZM4 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd2E9PZM4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd2E9PZM4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms