Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Gm27243-201ENSMUST00000183964 521 ntBASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Gm8227-201ENSMUST00000223306 571 ntBASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh17E9PXF0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Gm15370-201ENSMUST00000117158 253 ntBASIC12□□□□□ -0.49
Pcdh17E9PXF0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Gm5637-201ENSMUST00000153890 1119 ntBASIC12□□□□□ -0.49
Pcdh17E9PXF0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Gm24526-201ENSMUST00000082921 158 ntBASIC12□□□□□ -0.49
Pcdh17E9PXF0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12□□□□□ -0.49
Pcdh17E9PXF0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh17E9PXF0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Gm13297-201ENSMUST00000120205 934 ntBASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Gm18584-201ENSMUST00000203098 964 ntBASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Gm5781-201ENSMUST00000219792 443 ntBASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Gm7046-201ENSMUST00000221351 977 ntBASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh17E9PXF0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms