Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Gm45342-201ENSMUST00000210903 1363 ntBASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Gm15595-201ENSMUST00000120840 961 ntBASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC17.77■□□□□ 0.44
Hfm1D3Z4R1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hfm1D3Z4R1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hfm1D3Z4R1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gm11892-201ENSMUST00000117711 1202 ntBASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gm12899-201ENSMUST00000120565 551 ntBASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gm8492-201ENSMUST00000182375 987 ntBASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gm17831-201ENSMUST00000205579 900 ntBASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gm4607-201ENSMUST00000206649 577 ntBASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Hfm1D3Z4R1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm14314-201ENSMUST00000118225 1015 ntBASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm11246-201ENSMUST00000120880 345 ntBASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm23153-201ENSMUST00000175323 313 ntBASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Gm25517-201ENSMUST00000083865 134 ntBASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hfm1D3Z4R1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms