Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Brpf3B2KF05 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Brpf3B2KF05 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.27□□□□□ -0.12
Brpf3B2KF05 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Brpf3B2KF05 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Gm9522-201ENSMUST00000182394 926 ntBASIC14.27□□□□□ -0.13
Brpf3B2KF05 Gm17837-201ENSMUST00000186435 985 ntBASIC14.27□□□□□ -0.13
Brpf3B2KF05 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.27□□□□□ -0.13
Brpf3B2KF05 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Brpf3B2KF05 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.26□□□□□ -0.13
Brpf3B2KF05 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Gm28196-201ENSMUST00000187719 640 ntBASIC14.26□□□□□ -0.13
Brpf3B2KF05 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Brpf3B2KF05 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gm13813-201ENSMUST00000120998 787 ntBASIC14.25□□□□□ -0.13
Brpf3B2KF05 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brpf3B2KF05 Gm26035-201ENSMUST00000083065 308 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms