Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm13408-201ENSMUST00000119822 798 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm13935-201ENSMUST00000121859 798 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm43058-201ENSMUST00000197645 625 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.86□□□□□ -0.67
Col6a4A2AX52 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a4A2AX52 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm13611-201ENSMUST00000118269 318 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm15131-201ENSMUST00000119124 595 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm15547-201ENSMUST00000122152 333 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm2546-201ENSMUST00000182630 991 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm6458-201ENSMUST00000211573 635 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm11628-201ENSMUST00000117568 171 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm27552-201ENSMUST00000183351 62 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm27844-201ENSMUST00000183613 62 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.85□□□□□ -0.67
Col6a4A2AX52 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col6a4A2AX52 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.84□□□□□ -0.67
Col6a4A2AX52 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms