Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Gm12179-201ENSMUST00000118344 1272 ntBASIC6.6□□□□□ -1.35
Ubr4A2AN08 Mir6359-201ENSMUST00000183668 81 ntBASIC6.6□□□□□ -1.35
Ubr4A2AN08 AC117769.1-201ENSMUST00000224716 1120 ntBASIC6.6□□□□□ -1.35
Ubr4A2AN08 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 AC101945.2-201ENSMUST00000227886 1377 ntBASIC6.6□□□□□ -1.35
Ubr4A2AN08 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Gm13492-201ENSMUST00000119772 665 ntBASIC6.6□□□□□ -1.35
Ubr4A2AN08 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ubr4A2AN08 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm44414-201ENSMUST00000203660 2109 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 AC166836.1-201ENSMUST00000219933 1795 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm13117-201ENSMUST00000120894 691 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm26174-201ENSMUST00000158415 219 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm28833-201ENSMUST00000189671 559 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm44401-201ENSMUST00000204462 2375 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm3017-201ENSMUST00000203603 1126 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm23612-201ENSMUST00000103823 110 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm20945-201ENSMUST00000178122 1145 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm23576-201ENSMUST00000179918 110 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Gm42821-201ENSMUST00000199771 489 ntBASIC6.59□□□□□ -1.35
Ubr4A2AN08 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ubr4A2AN08 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Gm24466-201ENSMUST00000179978 109 ntBASIC6.59□□□□□ -1.36
Ubr4A2AN08 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Gm30437-201ENSMUST00000206086 1201 ntBASIC6.59□□□□□ -1.36
Ubr4A2AN08 Gm39288-201ENSMUST00000210554 446 ntBASIC6.59□□□□□ -1.36
Ubr4A2AN08 Olfr1347-205ENSMUST00000220413 964 ntBASIC6.59□□□□□ -1.36
Ubr4A2AN08 AC108416.1-202ENSMUST00000228927 1201 ntBASIC6.59□□□□□ -1.36
Ubr4A2AN08 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Gm5455-201ENSMUST00000058710 715 ntBASIC6.59□□□□□ -1.36
Ubr4A2AN08 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms