Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm5264-201ENSMUST00000190584 848 ntBASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm43125-201ENSMUST00000201724 730 ntBASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms