Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Map1b-203ENSMUST00000223725 2669 ntBASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.72□□□□□ -0.85
Trav7n-4A0A075B620 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.71□□□□□ -0.85
Trav7n-4A0A075B620 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm12428-201ENSMUST00000119844 727 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm12403-201ENSMUST00000121384 959 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm9630-201ENSMUST00000178304 885 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm10766-202ENSMUST00000194123 606 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm18206-201ENSMUST00000207027 926 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gm10819-201ENSMUST00000099988 561 ntBASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trav7n-4A0A075B620 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms