Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb3S4R1G7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.63□□□□□ -0.55
H2afb3S4R1G7 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb3S4R1G7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H2afb3S4R1G7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms