Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm8598-201ENSMUST00000221184 836 ntBASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
ClcnkaQ9WUB7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.9□□□□□ -0.51
ClcnkaQ9WUB7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
ClcnkaQ9WUB7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClcnkaQ9WUB7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 164.2 ms