Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Gm8652-201ENSMUST00000181363 964 ntBASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf40aQ9R1C7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.21□□□□□ -0.14
Prpf40aQ9R1C7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf40aQ9R1C7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf40aQ9R1C7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
Prpf40aQ9R1C7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.21□□□□□ -0.14
Prpf40aQ9R1C7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf40aQ9R1C7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf40aQ9R1C7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Gm11618-201ENSMUST00000117946 267 ntBASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Gm27839-201ENSMUST00000184242 106 ntBASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf40aQ9R1C7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Gm27847-201ENSMUST00000183711 107 ntBASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Gm27375-201ENSMUST00000183799 107 ntBASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Gm37319-201ENSMUST00000193500 636 ntBASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf40aQ9R1C7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms