Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm5419-201ENSMUST00000119301 527 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm13022-201ENSMUST00000121181 285 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm4654-201ENSMUST00000183305 982 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm4604-201ENSMUST00000025040 390 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm12164-201ENSMUST00000121695 551 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.57□□□□□ -0.4
Col4a4Q9QZR9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm8531-201ENSMUST00000188319 893 ntBASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm18304-201ENSMUST00000189162 546 ntBASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm38151-201ENSMUST00000195085 289 ntBASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm5714-201ENSMUST00000197343 566 ntBASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a4Q9QZR9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.55□□□□□ -0.4
Col4a4Q9QZR9 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms