Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm23931-201ENSMUST00000103842 109 ntBASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm1335-201ENSMUST00000121653 386 ntBASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm17420-201ENSMUST00000164753 153 ntBASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm5370-201ENSMUST00000187187 574 ntBASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Gm10478-201ENSMUST00000084451 396 ntBASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clcf1Q9QZM3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clcf1Q9QZM3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clcf1Q9QZM3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms