Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk3aQ9JKX8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Upk3aQ9JKX8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk3aQ9JKX8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Upk3aQ9JKX8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.4□□□□□ -0.43
Upk3aQ9JKX8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3aQ9JKX8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gm5187-201ENSMUST00000117317 991 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gm14127-201ENSMUST00000117906 678 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gm16379-201ENSMUST00000161469 348 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gm3890-201ENSMUST00000182416 207 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gm37424-201ENSMUST00000191727 561 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gm8762-201ENSMUST00000193486 339 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 AY702102-202ENSMUST00000194651 1173 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3aQ9JKX8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms