Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.29□□□□□ -0.76
Smco4Q9JIS3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco4Q9JIS3 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.29□□□□□ -0.76
Smco4Q9JIS3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.29□□□□□ -0.76
Smco4Q9JIS3 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm29257-201ENSMUST00000186115 639 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm2272-201ENSMUST00000194903 582 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco4Q9JIS3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Smco4Q9JIS3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.27□□□□□ -0.76
Smco4Q9JIS3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco4Q9JIS3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco4Q9JIS3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco4Q9JIS3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco4Q9JIS3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco4Q9JIS3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Gm23634-201ENSMUST00000175071 91 ntBASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Smco4Q9JIS3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms