Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Gm18473-201ENSMUST00000220543 868 ntBASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Matn2-203ENSMUST00000226766 3252 ntBASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb3Q9ERD7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb3Q9ERD7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb3Q9ERD7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb3Q9ERD7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb3Q9ERD7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Gm19931-201ENSMUST00000198920 368 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb3Q9ERD7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Gm6152-201ENSMUST00000151704 340 ntBASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb3Q9ERD7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms