Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gm24158-201ENSMUST00000175263 71 ntBASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim42Q9D2H5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm25911-201ENSMUST00000157621 56 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm37935-201ENSMUST00000192012 982 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm18905-201ENSMUST00000205454 928 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Shd-206ENSMUST00000225145 998 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim42Q9D2H5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim42Q9D2H5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms