Protein–RNA interactions for Protein: Q9CZG9

Pdzd11, PDZ domain-containing protein 11, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd11Q9CZG9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pdzd11Q9CZG9 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm43347-201ENSMUST00000200226 580 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gm6376-201ENSMUST00000209407 580 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Rps4l-201ENSMUST00000071745 943 ntBASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pdzd11Q9CZG9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Mir874-201ENSMUST00000104769 76 ntBASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Gm15173-201ENSMUST00000122049 433 ntBASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.06□□□□□ -0.8
Pdzd11Q9CZG9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms