Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Snf8Q9CZ28 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Matn2-203ENSMUST00000226766 3252 ntBASIC13.28□□□□□ -0.28
Snf8Q9CZ28 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Snf8Q9CZ28 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snf8Q9CZ28 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Snf8Q9CZ28 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snf8Q9CZ28 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Snf8Q9CZ28 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.27□□□□□ -0.28
Snf8Q9CZ28 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snf8Q9CZ28 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Mir686-201ENSMUST00000102174 109 ntBASIC13.27□□□□□ -0.29
Snf8Q9CZ28 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.27□□□□□ -0.29
Snf8Q9CZ28 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Gm24694-201ENSMUST00000180054 110 ntBASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Snf8Q9CZ28 Gm5354-201ENSMUST00000182417 973 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms