Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gm23958-201ENSMUST00000157207 105 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gm22885-201ENSMUST00000157410 107 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gm27516-201ENSMUST00000184237 98 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gm45930-201ENSMUST00000221330 292 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm3890-201ENSMUST00000182416 207 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Mir8109-201ENSMUST00000184375 117 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm43553-201ENSMUST00000200900 685 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.24□□□□□ -0.45
Otud1Q9CUB6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.23□□□□□ -0.45
Otud1Q9CUB6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms