Protein–RNA interactions for Protein: Q9CQF3

Nudt21, Cleavage and polyadenylation specificity factor subunit 5, mousemouse

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudt21Q9CQF3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm22058-201ENSMUST00000083393 310 ntBASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.28□□□□□ -0.44
Nudt21Q9CQF3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Matn2-206ENSMUST00000228570 2798 ntBASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nudt21Q9CQF3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm25890-201ENSMUST00000177643 165 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm22614-201ENSMUST00000178300 165 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm18041-201ENSMUST00000218210 618 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm22042-201ENSMUST00000082989 165 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm26110-201ENSMUST00000083971 165 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nudt21Q9CQF3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms