Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Prpf8Q99PV0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gm6458-201ENSMUST00000211573 635 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gm15276-201ENSMUST00000145953 498 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Mir6979-201ENSMUST00000183927 56 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Morn2-202ENSMUST00000227729 656 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Prpf8Q99PV0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Gm25732-201ENSMUST00000175168 60 ntBASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Mir6927-201ENSMUST00000184494 71 ntBASIC10.56□□□□□ -0.72
Prpf8Q99PV0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Gm45186-201ENSMUST00000206874 478 ntBASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Gm8959-201ENSMUST00000213150 571 ntBASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Prpf8Q99PV0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms