Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Gm19091-201ENSMUST00000208120 978 ntBASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh15Q99PJ1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Gm3551-201ENSMUST00000190750 664 ntBASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Gm42657-201ENSMUST00000201746 211 ntBASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh15Q99PJ1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Gm3150-201ENSMUST00000166418 204 ntBASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Gm29410-201ENSMUST00000188383 694 ntBASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Gm18059-201ENSMUST00000208073 580 ntBASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Pcdh15Q99PJ1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Mir671-201ENSMUST00000102432 98 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm14193-201ENSMUST00000105067 153 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm5621-201ENSMUST00000187303 640 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm29499-201ENSMUST00000189151 486 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm28329-201ENSMUST00000191208 689 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm29171-201ENSMUST00000191397 486 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm17877-201ENSMUST00000192578 814 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Mt1-202ENSMUST00000211807 1085 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh15Q99PJ1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms