Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp1b1Q99LU0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Gm27701-201ENSMUST00000184498 110 ntBASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Gm28911-201ENSMUST00000188837 117 ntBASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Gm45841-201ENSMUST00000207700 164 ntBASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp1b1Q99LU0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.21□□□□□ -0.46
Chmp1b1Q99LU0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Pck2-205ENSMUST00000226352 2784 ntBASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm12928-201ENSMUST00000117115 573 ntBASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm9002-201ENSMUST00000178437 499 ntBASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Chmp1b1Q99LU0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.19□□□□□ -0.46
Chmp1b1Q99LU0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms