Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.58□□□□□ -0.24
Clp1Q99LI9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.58□□□□□ -0.24
Clp1Q99LI9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Clp1Q99LI9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Mir7032-201ENSMUST00000185154 79 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm7467-201ENSMUST00000185173 652 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm19187-201ENSMUST00000206781 892 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm45598-202ENSMUST00000210719 986 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm7848-201ENSMUST00000210739 718 ntBASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clp1Q99LI9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gm9211-201ENSMUST00000182882 975 ntBASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gm28882-201ENSMUST00000185504 314 ntBASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.56□□□□□ -0.24
Clp1Q99LI9 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.56□□□□□ -0.24
Clp1Q99LI9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clp1Q99LI9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clp1Q99LI9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clp1Q99LI9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Clp1Q99LI9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clp1Q99LI9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clp1Q99LI9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clp1Q99LI9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clp1Q99LI9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms