Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.84□□□□□ -0.03
Rfc4Q99J62 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc4Q99J62 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc4Q99J62 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc4Q99J62 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rfc4Q99J62 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc4Q99J62 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc4Q99J62 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc4Q99J62 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gm25043-201ENSMUST00000158604 212 ntBASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gm25700-201ENSMUST00000177693 110 ntBASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gm44405-201ENSMUST00000198952 126 ntBASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gm43947-201ENSMUST00000203019 959 ntBASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gm45925-201ENSMUST00000218882 744 ntBASIC14.83□□□□□ -0.04
Rfc4Q99J62 Gm8712-201ENSMUST00000221090 701 ntBASIC14.83□□□□□ -0.04
Rfc4Q99J62 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc4Q99J62 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.82□□□□□ -0.04
Rfc4Q99J62 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.82□□□□□ -0.04
Rfc4Q99J62 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.82□□□□□ -0.04
Rfc4Q99J62 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Gm27023-201ENSMUST00000182372 285 ntBASIC14.82□□□□□ -0.04
Rfc4Q99J62 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Gm43378-201ENSMUST00000199336 582 ntBASIC14.82□□□□□ -0.04
Rfc4Q99J62 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.82□□□□□ -0.04
Rfc4Q99J62 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc4Q99J62 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.82□□□□□ -0.04
Rfc4Q99J62 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfc4Q99J62 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms