Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col20a1Q923P0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Gm15236-201ENSMUST00000117309 379 ntBASIC15.19■□□□□ 0.02
Col20a1Q923P0 Gm15808-201ENSMUST00000119046 604 ntBASIC15.19■□□□□ 0.02
Col20a1Q923P0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Gm8018-201ENSMUST00000173536 789 ntBASIC15.19■□□□□ 0.02
Col20a1Q923P0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.19■□□□□ 0.02
Col20a1Q923P0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.19■□□□□ 0.02
Col20a1Q923P0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.19■□□□□ 0.02
Col20a1Q923P0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.19■□□□□ 0.02
Col20a1Q923P0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col20a1Q923P0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.18■□□□□ 0.02
Col20a1Q923P0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.18■□□□□ 0.02
Col20a1Q923P0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.18■□□□□ 0.02
Col20a1Q923P0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.18■□□□□ 0.02
Col20a1Q923P0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col20a1Q923P0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.17■□□□□ 0.02
Col20a1Q923P0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col20a1Q923P0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms