Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.41□□□□□ -0.26
Pcdhb1Q91Y08 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Gm14921-201ENSMUST00000118643 908 ntBASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Gm26185-201ENSMUST00000157692 266 ntBASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Gm4271-201ENSMUST00000174444 973 ntBASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Gm27839-201ENSMUST00000184242 106 ntBASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Gm37042-201ENSMUST00000193816 581 ntBASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Gm29705-201ENSMUST00000212598 474 ntBASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Mir339-201ENSMUST00000083659 96 ntBASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb1Q91Y08 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb1Q91Y08 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Pcdhb1Q91Y08 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb1Q91Y08 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb1Q91Y08 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm22121-201ENSMUST00000175148 54 ntBASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm8099-201ENSMUST00000200510 742 ntBASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm7561-201ENSMUST00000211203 886 ntBASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb1Q91Y08 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms