Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm24541-201ENSMUST00000103871 96 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm5656-201ENSMUST00000171020 1096 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm44548-201ENSMUST00000208929 192 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm9229-201ENSMUST00000222777 126 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb3Q91XZ7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm3436-201ENSMUST00000179930 840 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm2423-201ENSMUST00000074863 733 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb3Q91XZ7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb3Q91XZ7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms