Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Gm29127-201ENSMUST00000188304 517 ntBASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhb6Q91XZ4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Gm26927-201ENSMUST00000182385 965 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Gm4768-201ENSMUST00000206199 686 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Gm32025-201ENSMUST00000217960 307 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb6Q91XZ4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Gm16177-201ENSMUST00000120728 718 ntBASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Gm12363-201ENSMUST00000122250 668 ntBASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms