Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm16202-201ENSMUST00000117532 544 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm11618-201ENSMUST00000117946 267 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Snora78-201ENSMUST00000158630 128 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm8810-201ENSMUST00000172895 754 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm37922-201ENSMUST00000195596 455 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm8598-201ENSMUST00000221184 836 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga4Q91XY4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Gm13226-201ENSMUST00000117838 404 ntBASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Gm12384-201ENSMUST00000119228 919 ntBASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Gm11425-201ENSMUST00000119608 498 ntBASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Gm9396-201ENSMUST00000076703 567 ntBASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga4Q91XY4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhga4Q91XY4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms