Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pspc1Q8R326 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pspc1Q8R326 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.82□□□□□ -0.04
Pspc1Q8R326 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.82□□□□□ -0.04
Pspc1Q8R326 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pspc1Q8R326 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.81□□□□□ -0.04
Pspc1Q8R326 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Gm25668-201ENSMUST00000157700 129 ntBASIC14.81□□□□□ -0.04
Pspc1Q8R326 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.81□□□□□ -0.04
Pspc1Q8R326 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.81□□□□□ -0.04
Pspc1Q8R326 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.81□□□□□ -0.04
Pspc1Q8R326 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.81□□□□□ -0.04
Pspc1Q8R326 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pspc1Q8R326 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Gm17376-201ENSMUST00000166016 84 ntBASIC14.8□□□□□ -0.04
Pspc1Q8R326 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pspc1Q8R326 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms