Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Nsd1-205ENSMUST00000224693 852 ntBASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp7Q8R1T1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp7Q8R1T1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Gm19208-201ENSMUST00000213861 912 ntBASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.45■□□□□ 0.22
Chmp7Q8R1T1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gm4909-201ENSMUST00000118749 794 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gm16296-201ENSMUST00000159905 325 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gm25700-201ENSMUST00000177693 110 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.44■□□□□ 0.22
Chmp7Q8R1T1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp7Q8R1T1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms