Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Gm12363-201ENSMUST00000122250 668 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Gm17208-201ENSMUST00000168388 535 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Mir7085-201ENSMUST00000184353 66 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Gm4768-201ENSMUST00000206199 686 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3a1Q8K4Z5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.79■□□□□ 0.12
Sf3a1Q8K4Z5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sf3a1Q8K4Z5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Gm12291-201ENSMUST00000121627 311 ntBASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Gm22121-201ENSMUST00000175148 54 ntBASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sf3a1Q8K4Z5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Sf3a1Q8K4Z5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sf3a1Q8K4Z5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sf3a1Q8K4Z5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sf3a1Q8K4Z5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sf3a1Q8K4Z5 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.77■□□□□ 0.11
Sf3a1Q8K4Z5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms