Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf4Q8K4J2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ebf4Q8K4J2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm15240-201ENSMUST00000118156 720 ntBASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm15393-201ENSMUST00000120499 219 ntBASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm27390-201ENSMUST00000184516 176 ntBASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms