Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Mir497b-201ENSMUST00000093601 125 ntBASIC12.73□□□□□ -0.37
Vps50Q8CI71 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.73□□□□□ -0.37
Vps50Q8CI71 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps50Q8CI71 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Gm13829-201ENSMUST00000119600 138 ntBASIC12.72□□□□□ -0.37
Vps50Q8CI71 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Gm17150-201ENSMUST00000165577 381 ntBASIC12.72□□□□□ -0.37
Vps50Q8CI71 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Gm6244-201ENSMUST00000178732 841 ntBASIC12.72□□□□□ -0.37
Vps50Q8CI71 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.72□□□□□ -0.37
Vps50Q8CI71 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.72□□□□□ -0.37
Vps50Q8CI71 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps50Q8CI71 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.71□□□□□ -0.37
Vps50Q8CI71 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Gm6983-201ENSMUST00000214912 628 ntBASIC12.71□□□□□ -0.37
Vps50Q8CI71 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Gm25857-201ENSMUST00000082788 129 ntBASIC12.71□□□□□ -0.37
Vps50Q8CI71 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps50Q8CI71 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.71□□□□□ -0.38
Vps50Q8CI71 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vps50Q8CI71 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps50Q8CI71 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms