Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Gm5312-201ENSMUST00000203728 547 ntBASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28bQ8CEG5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Gm17795-201ENSMUST00000214505 757 ntBASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28bQ8CEG5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms