Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim52Q8CDV4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim52Q8CDV4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm44651-201ENSMUST00000207343 372 ntBASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim52Q8CDV4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Gm42937-201ENSMUST00000197360 752 ntBASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Gm8913-201ENSMUST00000209491 641 ntBASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim52Q8CDV4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Gm14277-201ENSMUST00000121195 360 ntBASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Rmrp-201ENSMUST00000157463 271 ntBASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Gm5070-201ENSMUST00000177599 862 ntBASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Trim52Q8CDV4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim52Q8CDV4 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.8■□□□□ 0.12
Trim52Q8CDV4 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.8■□□□□ 0.12
Trim52Q8CDV4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim52Q8CDV4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms