Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.04■□□□□ -0
Vps53Q8CCB4 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.04■□□□□ -0
Vps53Q8CCB4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps53Q8CCB4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.03■□□□□ -0
Vps53Q8CCB4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Gm29608-201ENSMUST00000190444 463 ntBASIC15.03■□□□□ -0
Vps53Q8CCB4 Gm3961-201ENSMUST00000204425 994 ntBASIC15.03■□□□□ -0
Vps53Q8CCB4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.03■□□□□ -0
Vps53Q8CCB4 Itm2b-204ENSMUST00000228637 783 ntBASIC15.03■□□□□ -0
Vps53Q8CCB4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Vps53Q8CCB4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps53Q8CCB4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.02■□□□□ -0
Vps53Q8CCB4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.02■□□□□ -0
Vps53Q8CCB4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.02■□□□□ -0
Vps53Q8CCB4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.02■□□□□ -0
Vps53Q8CCB4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps53Q8CCB4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vps53Q8CCB4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.02□□□□□ -0.01
Vps53Q8CCB4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Gm5687-201ENSMUST00000118252 640 ntBASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Gm1335-201ENSMUST00000121653 386 ntBASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Gm38002-201ENSMUST00000193255 180 ntBASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Gm38266-201ENSMUST00000194931 421 ntBASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Gm9823-201ENSMUST00000051212 327 ntBASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps53Q8CCB4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms