Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Mir1938-201ENSMUST00000158746 100 ntBASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Gm29396-201ENSMUST00000185659 716 ntBASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Gm43438-201ENSMUST00000198133 379 ntBASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Alx1Q8C8B0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gm8908-201ENSMUST00000121633 1024 ntBASIC15□□□□□ -0.01
Alx1Q8C8B0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gm5904-201ENSMUST00000210286 865 ntBASIC15□□□□□ -0.01
Alx1Q8C8B0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Gm28323-201ENSMUST00000186817 2499 ntBASIC15□□□□□ -0.01
Alx1Q8C8B0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Alx1Q8C8B0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15□□□□□ -0.01
Alx1Q8C8B0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Mir8109-201ENSMUST00000184375 117 ntBASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Alx1Q8C8B0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Alx1Q8C8B0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms