Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Gm13296-201ENSMUST00000117854 997 ntBASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Gm13875-201ENSMUST00000120162 282 ntBASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Gm8194-201ENSMUST00000159783 859 ntBASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col6a6Q8C6K9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm10051-201ENSMUST00000145209 414 ntBASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col6a6Q8C6K9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Spcs1-203ENSMUST00000226374 592 ntBASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.6□□□□□ -0.55
Col6a6Q8C6K9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms