Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp44Q8C2S0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Gm22018-201ENSMUST00000104357 131 ntBASIC15.07■□□□□ 0
Usp44Q8C2S0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Gm7809-201ENSMUST00000153199 742 ntBASIC15.07■□□□□ 0
Usp44Q8C2S0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Usp44Q8C2S0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.07■□□□□ 0
Usp44Q8C2S0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.07■□□□□ 0
Usp44Q8C2S0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp44Q8C2S0 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.06■□□□□ 0
Usp44Q8C2S0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Usp44Q8C2S0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Usp44Q8C2S0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Usp44Q8C2S0 Snora78-201ENSMUST00000158630 128 ntBASIC15.06■□□□□ 0
Usp44Q8C2S0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.06■□□□□ 0
Usp44Q8C2S0 Gm3890-201ENSMUST00000182416 207 ntBASIC15.06■□□□□ 0
Usp44Q8C2S0 Gm18584-201ENSMUST00000203098 964 ntBASIC15.06■□□□□ 0
Usp44Q8C2S0 Gm24526-201ENSMUST00000082921 158 ntBASIC15.06■□□□□ 0
Usp44Q8C2S0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.06■□□□□ 0
Usp44Q8C2S0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Usp44Q8C2S0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Usp44Q8C2S0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp44Q8C2S0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Usp44Q8C2S0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.05■□□□□ 0
Usp44Q8C2S0 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.05■□□□□ 0
Usp44Q8C2S0 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.05■□□□□ 0
Usp44Q8C2S0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.05■□□□□ 0
Usp44Q8C2S0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp44Q8C2S0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.05■□□□□ 0
Usp44Q8C2S0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.05■□□□□ 0
Usp44Q8C2S0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp44Q8C2S0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp44Q8C2S0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Usp44Q8C2S0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Usp44Q8C2S0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.05■□□□□ -0
Usp44Q8C2S0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Usp44Q8C2S0 Gm5187-201ENSMUST00000117317 991 ntBASIC15.05■□□□□ -0
Usp44Q8C2S0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Usp44Q8C2S0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Usp44Q8C2S0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.05■□□□□ -0
Usp44Q8C2S0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.05■□□□□ -0
Usp44Q8C2S0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.05■□□□□ -0
Usp44Q8C2S0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.05■□□□□ -0
Usp44Q8C2S0 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.05■□□□□ -0
Usp44Q8C2S0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Usp44Q8C2S0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp44Q8C2S0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms