Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm29588-201ENSMUST00000185738 298 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm20819-201ENSMUST00000191091 925 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm37710-201ENSMUST00000193501 1274 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm42857-201ENSMUST00000200823 339 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm44135-201ENSMUST00000205221 368 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm44954-201ENSMUST00000208513 227 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm18705-201ENSMUST00000215985 913 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 AC110816.1-201ENSMUST00000218559 980 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 AC154198.1-201ENSMUST00000222839 424 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 AC164302.1-201ENSMUST00000227036 433 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm14945-201ENSMUST00000119556 1118 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim35Q8C006 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm9824-201ENSMUST00000178707 561 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm37491-201ENSMUST00000192552 1111 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm43232-201ENSMUST00000201346 364 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm7554-201ENSMUST00000202282 574 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm44656-201ENSMUST00000208428 490 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 AC154461.4-201ENSMUST00000224878 468 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gpr87-201ENSMUST00000056898 1080 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Gm22864-201ENSMUST00000083950 130 ntBASIC14.23□□□□□ -0.13
Trim35Q8C006 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim35Q8C006 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim35Q8C006 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim35Q8C006 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim35Q8C006 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm27430-201ENSMUST00000184585 107 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms