Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Gm20414-201ENSMUST00000172918 646 ntBASIC10.03□□□□□ -0.8
Chd9Q8BYH8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Chd9Q8BYH8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Gm26957-201ENSMUST00000182645 977 ntBASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.02□□□□□ -0.8
Chd9Q8BYH8 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Chd9Q8BYH8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Gm28071-201ENSMUST00000190355 478 ntBASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Gm18038-201ENSMUST00000197900 485 ntBASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Gm5599-201ENSMUST00000209602 788 ntBASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd9Q8BYH8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gm45594-201ENSMUST00000211717 241 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gm26013-201ENSMUST00000104404 119 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gm12684-201ENSMUST00000118675 999 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.01□□□□□ -0.81
Chd9Q8BYH8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.01□□□□□ -0.81
Chd9Q8BYH8 Gm27675-201ENSMUST00000184527 94 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms