Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm10434-201ENSMUST00000101158 471 ntBASIC13□□□□□ -0.33
Ubr7Q8BU04 Gm22323-201ENSMUST00000103832 109 ntBASIC13□□□□□ -0.33
Ubr7Q8BU04 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13□□□□□ -0.33
Ubr7Q8BU04 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13□□□□□ -0.33
Ubr7Q8BU04 Gm7584-201ENSMUST00000175829 940 ntBASIC13□□□□□ -0.33
Ubr7Q8BU04 Gm38341-201ENSMUST00000195357 515 ntBASIC13□□□□□ -0.33
Ubr7Q8BU04 Gm21769-201ENSMUST00000211922 111 ntBASIC13□□□□□ -0.33
Ubr7Q8BU04 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Gm22058-201ENSMUST00000083393 310 ntBASIC13□□□□□ -0.33
Ubr7Q8BU04 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ubr7Q8BU04 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ubr7Q8BU04 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13□□□□□ -0.33
Ubr7Q8BU04 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubr7Q8BU04 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ubr7Q8BU04 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm2991-201ENSMUST00000173338 480 ntBASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm37259-201ENSMUST00000193903 849 ntBASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm3786-201ENSMUST00000202659 378 ntBASIC12.99□□□□□ -0.33
Ubr7Q8BU04 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubr7Q8BU04 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gm13736-201ENSMUST00000119272 253 ntBASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gm13350-201ENSMUST00000120519 479 ntBASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gm27243-201ENSMUST00000183964 521 ntBASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.98□□□□□ -0.33
Ubr7Q8BU04 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms