Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4Q8BQZ5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4Q8BQZ5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm12390-201ENSMUST00000117897 397 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm5687-201ENSMUST00000118252 640 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm6152-201ENSMUST00000151704 340 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm7561-201ENSMUST00000211203 886 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm18473-201ENSMUST00000220543 868 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpsf4Q8BQZ5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Gm11814-201ENSMUST00000119515 929 ntBASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Gm11803-201ENSMUST00000119966 444 ntBASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.51□□□□□ -0.41
Cpsf4Q8BQZ5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms